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Workshop NGS Data Analysis with Galaxy

Want to strengthen your skills in NGS data analysis? Join us for a two-day hands-on training organized by ecseq bioinformatics for the SaxoCell consortium!

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We are pleased to invite you to a two-day training course on Next-Generation Sequencing (NGS) Data Analysis using Galaxy, organized by ecseq bioinformatics for the SaxoCell consortium.

The training combines essential theoretical concepts with guided practical exercises in the browser-based Galaxy environment. Participants will learn how to assess sequencing data quality, map reads to a reference genome, visualize alignments and perform DNA variant analysis.

Training details

Date: 18–19 January 2027
Time: To be announced
Venue: ScaDS.AI, Leipzig
Trainers: Dr. David Langenberger and Dr. Mario Fasold
Participation fee: Free of charge for SaxoCell members and partners

Topics covered

Galaxy essentials: Navigating the interface, managing datasets and histories, and working with analysis workflows
NGS fundamentals: Sequencing concepts, DNA sequencing (DNA-Seq) and key file formats
Read quality control: Assessing read quality and preprocessing sequencing data
Read mapping: Aligning reads to a reference genome and assessing mapping results
Visualization: Inspecting alignments in a genome browser
DNA variant analysis: Calling, filtering and interpreting variants in VCF files

The course is designed to provide participants with practical skills and a solid foundation for working with NGS data.

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Veranstaltungsort

Löhrs Carré
ScaDS.AI Leipzig
Humboldtstraße 25
04105 Leipzig
Deutschland

Koordinaten (Lat, Long):
51.346924, 12.373898

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Venue and Directions

ScaDS.AI Leipzig
Löhrs Carré
Humboldtstraße 25, 3rd floor
04105 Leipzig, Germany

By train and public transport

ScaDS.AI is located approximately a 10-minute walk from Leipzig Central Station (Leipzig Hauptbahnhof). Alternatively, you can take a tram to Goerdelerring, which is served by several tram lines. From there, the venue is just a short walk away.

Finding the venue

Enter Löhrs Carré through the main entrance on Humboldtstraße 25, next to the Sparkasse bank. At reception, please state that you are attending the workshop at ScaDS.AI on the 3rd floor.

Once upstairs, look for the keypad next to the elevators and dial the extension number of your workshop contact. Someone will come and let you in.

If you have any difficulties finding the venue, please contact the ScaDS.AI office for assistance.